Advanced Organismal Biology ©

Bioe 200B

Ecology and Evolutionary Biology

Fall 2012

 

 

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NEWS, NOTES AND PDFS
Last modified: 4 December 2012

FOX Readings:

Nov 15: Callaway & Aschoug 2000. Invasive plants vs their new and old neighbors.

Nov 20: Levine. 2000. Species diversity, biotic invasions, and scale issues

Nov 27: Schmitz. 2008. Effects of predator hunting mode on ecosystem function

Nov 29: Ling.2009. Overfishing, resilience of kelp beds, and climate-driven phase shifts.

Dec 4 : Zavaleta 2010. Multiple ecosystem functions and species diversity

Dec 6: Siepielski et al. 2010. Experimental evidence for neutral community dynamics

...This paper is longer than our usual. I chose it because it is an experimental test of neutral vs. niche dynamics, and has a particularly interesting and readable discussion of the issues. Since most of you have probably not been exposed to neutral theory before this class, this discussion should be very useful, particularly as it clarifies predictions of neutral vs. niche series. You may ignore the models on pages 848, 849, and 854.

For another takeon neutral theory (and the most common types of tests) I have also included a recent paper testing neutral theory and the heated set of comments that are generated. See Ricklefs & Renner 2012: Tropical tree species richness and abundance reject neutrality.

 

Click on the Highlighted sections to download a pdf.

Critiquing a paper and leading a discussion

Checklist for critiquing a research article

 

READINGS RITA MEHTA LECTURE THURS NOV 8

Do reefs drive diversification in teleost fish?

 

READINGS LYON SECTION

 

Tuesday November 6:

(Any resemblence between these papers and Tuesdays election is purely coincidental!)

Social conflict within species paper (ICE) Rice and Holland

Greenbeard killing ants paper Keller et al.

 

Tuesday October 30:

Cuckoo chick vocal mimicry paper

Kin selected leks in turkeys paper

 

Tuesday October 23: Gould and Lewontin Spandrels of San Marco

 

 

 

 

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Readings Costa Section

Physiological Constraint and Life History Tradeoffs

Tuesday Oct 2

Dayton, G. H. and L. A. Fitzgerald. 2011. The advantage of no defense: predation enhances cohort survival in a desert amphibian. Aquatic Ecology 45:325-333.

 

Thursday Oct 4

Chapin III, F. S., K. Autumn, and F. Pugnaire. 1993. Evolution of Suites of Traits in Response to Environmental Stress. The American Naturalist 142:S78-S92.

 

Ecological Implications of Body SizeTuesday Oct 9

Wikelski, M. 2005. Evolution of body size in Galapagos marine iguanas. Proceedings of the Royal Society B-Biological Sciences 272:1985-1993.

 

Temperature Adaptation

Thursday Oct 11

Gilbert, C., S. Blanc, Y. Le Maho, and A. Ancel. 2008. Energy saving processes in huddling emperor penguins: from experiments to theory. Journal of Experimental Biology 211:1-8Gi

 

Lenski, R. E. and A. F. Bennett. 1993. Evolutionary Response of Escherichia coli to Thermal Stress. The American Naturalist 142:S47-S64.

 

Linking Proximate to Ultimate

Tuesday Oct 16

Wikelski, M. and S. J. Cooke. 2006. Conservation physiology. Trends Ecol. Evol. 21:38-46.

Saraux, C., C. Le Bohec, J. M. Durant, V. A. Viblanc, M. Gauthier-Clerc, D. Beaune, Y. H. Park, N. G. Yoccoz, N. C. Stenseth, and Y. Le Maho. 2011. Reliability of flipper-banded penguins as indicators of climate change. Nature 469:203-206

 

Additional Readings

 

Brown, J. H. and P. F. Nicoletto. 1991. Spatial Scaling of Species Composition: Body Masses of North American Land Mammals. The American Naturalist 138 :1478-1512.

Hetem, R. S., W. M. Strauss, L. G. Fick, S. K. Maloney, L. C. R. Meyer, M. Shobrak, A. Fuller, and D. Mitchell. 2010. Variation in the daily rhythm of body temperature of free-living Arabian oryx (Oryx leucoryx): does water limitation drive heterothermy? Journal of Comparative Physiology B-Biochemical Systemic and Environmental Physiology 180 :1111-1119.

 

Chamberlin, T. C. 1965. The method of multiple working hypotheses. Science 148:754-759.

Platt, J. R. 1964. Strong Inference. Science 146:347-353.

Gould, S. J. and R. C. Lewontin. 1979. The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme. Proc R Soc Lond B Biol Sci 205:581-598.

 

 

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